Hey Ive probably done it wrong but: Set on everypokemon : Catch Tranfer, keep 2 of highest CP & IV Another setting is I checked the transfer box also Heres a bit of the settings Ive used (note the identifier is uniqe to that pokemon) You need to register and have one post to see spoilers!
can you please upload your logs as well as a screenshot of the settings? It would make it a bit easier Thank you!
Can be marked as solved, it helped to check the box "transfer pokemon to professor" in the general tab ;D